Research workbench
AlphaFold monomer V2.0 prediction for protein SMG9 (Q2YDD2)
Analyse AlphaFold monomer V2.0 prediction for protein SMG9 (Q2YDD2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2YDD2
- Type
- protein
- Length
- 520 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Protein SMG9
- UniProt
- Q2YDD2
- Pockets
- 4 · best druggability 0.59
Structure
1 distinct chain · 25% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein SMG9 | protein | 520 | 25% helix, 10% strand | Q2YDD2 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 188 | 0.59 | 0.81 | 26 | empty |
| 2 | 91 | 0.42 | 0.78 | 18 | empty |
| 3 | 87 | 0.36 | 0.75 | 20 | empty |
| 4 | 51 | 0.34 | 0.79 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2YDD2
- Elsewhere: UniProt Q2YDD2 · AlphaFold DB Q2YDD2
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