Research workbench
AlphaFold monomer V2.0 prediction for protein SMG8 (B4LS82)
Analyse AlphaFold monomer V2.0 prediction for protein SMG8 (B4LS82) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B4LS82
- Type
- protein
- Length
- 962 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- Protein SMG8
- UniProt
- B4LS82
- Pockets
- 9 · best druggability 0.65
Structure
1 distinct chain · 28% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein SMG8 | protein | 962 | 28% helix, 16% strand | B4LS82 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 250 | 0.65 | 0.82 | 43 | empty |
| 2 | 328 | 0.60 | 0.78 | 39 | empty |
| 3 | 127 | 0.51 | 0.80 | 21 | empty |
| 4 | 230 | 0.48 | 0.74 | 25 | empty |
| 5 | 153 | 0.44 | 0.75 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4LS82
- Elsewhere: UniProt B4LS82 · AlphaFold DB B4LS82
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.