Research workbench
AlphaFold monomer V2.0 prediction for protein SMG8 (B4GH42)
Analyse AlphaFold monomer V2.0 prediction for protein SMG8 (B4GH42) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B4GH42
- Type
- protein
- Length
- 953 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8B68258Ca46852D03B69a12F533693A548Bb3f7A
- Molecule
- Protein SMG8
- UniProt
- B4GH42
- Pockets
- 10 · best druggability 0.53
Structure
1 distinct chain · 31% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein SMG8 | protein | 953 | 31% helix, 17% strand | B4GH42 |
Pockets
10 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 277 | 0.53 | 0.75 | 32 | empty |
| 2 | 165 | 0.50 | 0.78 | 22 | empty |
| 3 | 152 | 0.48 | 0.77 | 22 | empty |
| 4 | 147 | 0.46 | 0.76 | 22 | empty |
| 5 | 101 | 0.42 | 0.78 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4GH42
- Elsewhere: UniProt B4GH42 · AlphaFold DB B4GH42
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