Research workbench
AlphaFold monomer V2.0 prediction for sphingomyelinase D (F2SCC4)
Analyse AlphaFold monomer V2.0 prediction for sphingomyelinase D (F2SCC4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- F2SCC4
- Type
- protein
- Length
- 323 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7A8d0de136F476946697d10c096A32feA3C2aFd7
- Molecule
- Sphingomyelinase D
- UniProt
- F2SCC4
- Pockets
- 2 · best druggability 0.64
Structure
1 distinct chain · 32% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sphingomyelinase D | protein | 323 | 32% helix, 19% strand | F2SCC4 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 484 | 0.64 | 0.77 | 47 | empty |
| 2 | 54 | 0.48 | 0.86 | 20 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F2SCC4
- Elsewhere: UniProt F2SCC4 · AlphaFold DB F2SCC4
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