Research workbench
AlphaFold monomer V2.0 prediction for scm-like with four mbt domains protein 1 (Q9JMD1)
Analyse AlphaFold monomer V2.0 prediction for scm-like with four mbt domains protein 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9JMD1
- Type
- protein
- Length
- 863 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF8cD1d8d93E9783063700De244A6e3cf6A195579
- Molecule
- Scm-like with four mbt domains protein 1
- UniProt
- Q9JMD1
- Pockets
- 8 · best druggability 0.81
Structure
1 distinct chain · 23% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Scm-like with four mbt domains protein 1 | protein | 863 | 23% helix, 19% strand | Q9JMD1 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 922 | 0.81 | 0.83 | 74 | empty |
| 2 | 412 | 0.62 | 0.77 | 48 | empty |
| 3 | 228 | 0.53 | 0.77 | 26 | empty |
| 4 | 122 | 0.42 | 0.76 | 21 | empty |
| 5 | 94 | 0.39 | 0.77 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9JMD1
- Elsewhere: UniProt Q9JMD1 · AlphaFold DB Q9JMD1
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