Research workbench
AlphaFold monomer V2.0 prediction for transcriptional regulator slya (B1JJ73)
Analyse AlphaFold monomer V2.0 prediction for transcriptional regulator slya (B1JJ73) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1JJ73
- Type
- protein
- Length
- 143 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x239f46D6762da5B7b108949c2F4580f21ccD7e24
- Molecule
- Transcriptional regulator slya
- UniProt
- B1JJ73
- Pockets
- 1 · best druggability 0.50
Structure
1 distinct chain · 69% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcriptional regulator slya | protein | 143 | 69% helix, 12% strand | B1JJ73 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 232 | 0.50 | 0.74 | 21 | empty |
Compared structures
- 4AIJ · Crystal structure of RovA from Yersinia in complex with a rovA promoter fragment · an experimental structure of the same protein · chain A against B, TM-score 0.94
- 4AIJ · Crystal structure of rova from yersinia in complex with a rova promoter fragment · an experimental structure of the same protein · chain A against B, TM-score 0.94
- 4AIK · Crystal structure of RovA from Yersinia in complex with an invasin promoter fragment · an experimental structure of the same protein · chain A against B, TM-score 0.93
- 4AIK · Crystal structure of rova from yersinia in complex with an invasin promoter fragment · an experimental structure of the same protein · chain A against B, TM-score 0.93
- 4AIH · Crystal structure of rova from yersinia in its free form · an experimental structure of the same protein · chain A against A, TM-score 0.91
- 4AIH · Crystal structure of RovA from Yersinia in its free form · an experimental structure of the same protein · chain A against A, TM-score 0.91
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1JJ73
- Elsewhere: UniProt B1JJ73 · AlphaFold DB B1JJ73
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