Research workbench
AlphaFold monomer V2.0 prediction for transcriptional regulator slya (P40676)
Analyse AlphaFold monomer V2.0 prediction for transcriptional regulator slya (P40676) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P40676
- Type
- protein
- Length
- 144 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa5c421143c0C3c8674B862e86A6772B81f7Aef95
- Molecule
- Transcriptional regulator slya
- UniProt
- P40676
- Pockets
- 1 · best druggability 0.50
Structure
1 distinct chain · 69% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcriptional regulator slya | protein | 144 | 69% helix, 12% strand | P40676 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 231 | 0.50 | 0.75 | 25 | empty |
Compared structures
- 3DEU · Crystal structure of transcription regulatory protein slya from salmonella typhimurium in… · an experimental structure of the same protein · chain A against A, TM-score 0.89
- 3DEU · Crystal structure of transcription regulatory protein slyA from Salmonella typhimurium in… · an experimental structure of the same protein · chain A against A, TM-score 0.89
- 3Q5F · Crystal structure of the salmonella transcriptional regulator slya in complex with DNA · an experimental structure of the same protein · chain A against A, TM-score 0.87
- 3Q5F · Crystal structure of the Salmonella transcriptional regulator SlyA in complex with DNA · an experimental structure of the same protein · chain A against A, TM-score 0.87
- 3QPT · Crystal structure of the Salmonella transcriptional regulator SlyA · an experimental structure of the same protein · chain A against A, TM-score 0.78
- 3QPT · Crystal structure of the salmonella transcriptional regulator slya · an experimental structure of the same protein · chain A against A, TM-score 0.78
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P40676
- Elsewhere: UniProt P40676 · AlphaFold DB P40676
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