Research workbench
AlphaFold monomer V2.0 prediction for soluble lytic murein transglycosylase (P0AGC3)
Analyse AlphaFold monomer V2.0 prediction for soluble lytic murein transglycosylase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0AGC3
- Type
- protein
- Length
- 645 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
- Molecule
- Soluble lytic murein transglycosylase
- UniProt
- P0AGC3
- Pockets
- 5 · best druggability 0.55
Structure
1 distinct chain · 69% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Soluble lytic murein transglycosylase | protein | 645 | 69% helix, 0% strand | P0AGC3 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 166 | 0.55 | 0.80 | 23 | empty |
| 2 | 89 | 0.42 | 0.78 | 26 | empty |
| 3 | 105 | 0.40 | 0.76 | 18 | empty |
| 4 | 57 | 0.37 | 0.79 | 10 | empty |
| 5 | 51 | 0.27 | 0.74 | 10 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AGC3
- Elsewhere: UniProt P0AGC3 · AlphaFold DB P0AGC3
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