Research workbench
AlphaFold monomer V2.0 prediction for slit homolog 3 protein (O88280)
Analyse AlphaFold monomer V2.0 prediction for slit homolog 3 protein (O88280) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O88280
- Type
- protein
- Length
- 1,523 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8DD805493e22E8987a3BbCDFeD5cc3a28Cd35b3f
- Molecule
- Slit homolog 3 protein
- UniProt
- O88280
- Pockets
- 9 · best druggability 0.72
Structure
1 distinct chain · 9% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Slit homolog 3 protein | protein | 1523 | 9% helix, 26% strand | O88280 |
Pockets
9 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 201 | 0.72 | 0.89 | 29 | empty |
| 2 | 339 | 0.62 | 0.79 | 62 | empty |
| 3 | 390 | 0.59 | 0.76 | 35 | empty |
| 4 | 201 | 0.54 | 0.78 | 29 | empty |
| 5 | 266 | 0.50 | 0.74 | 32 | empty |
Modifications
Observed in the structure: 50 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O88280
- Elsewhere: UniProt O88280 · AlphaFold DB O88280
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