Research workbench
AlphaFold monomer V2.0 prediction for slit and ntrk-like protein 1 (Q96PX8)
Analyse AlphaFold monomer V2.0 prediction for slit and ntrk-like protein 1 (Q96PX8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q96PX8
- Type
- protein
- Length
- 696 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf87a97E0A4bB354D834857B14296240B167cbe70
- Molecule
- Slit and ntrk-like protein 1
- UniProt
- Q96PX8
- Pockets
- 3 · best druggability 0.71
Structure
1 distinct chain · 16% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Slit and ntrk-like protein 1 | protein | 696 | 16% helix, 15% strand | Q96PX8 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 609 | 0.71 | 0.79 | 76 | empty |
| 2 | 122 | 0.69 | 0.91 | 36 | empty |
| 3 | 177 | 0.43 | 0.74 | 30 | empty |
Modifications
Observed in the structure: 8 disulfide (disulfide).
Compared structures
- 4RCA · Crystal structure of human PTPdelta and human Slitrk1 complex · an experimental structure of the same protein · chain A against B, TM-score 0.34
- 4RCA · Crystal structure of human ptpdelta and human SLITRK1 complex · an experimental structure of the same protein · chain A against B, TM-score 0.34
- 4RCW · Crystal structure of human Slitrk1 · an experimental structure of the same protein · chain A against A, TM-score 0.33
- 4RCW · Crystal structure of human SLITRK1 · an experimental structure of the same protein · chain A against A, TM-score 0.33
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q96PX8
- Elsewhere: UniProt Q96PX8 · AlphaFold DB Q96PX8
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