Research workbench
AlphaFold monomer V2.0 prediction for snaclec EMS16 subunit alpha (Q7T2Q1)
Analyse AlphaFold monomer V2.0 prediction for snaclec EMS16 subunit alpha (Q7T2Q1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7T2Q1
- Type
- protein
- Length
- 157 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7012c0b45c68a2c067644b9d3e5DDa06892c6957
- Molecule
- Snaclec EMS16 subunit alpha
- UniProt
- Q7T2Q1
- Pockets
- 1 · best druggability 0.28
Structure
1 distinct chain · 18% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Snaclec EMS16 subunit alpha | protein | 157 | 18% helix, 26% strand | Q7T2Q1 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 55 | 0.28 | 0.75 | 19 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 1V7P · Structure of EMS16-alpha2-I domain complex · an experimental structure of the same protein · chain A against A, TM-score 0.84
- 1V7P · Structure of EMS16-ALPHA2-I domain complex · an experimental structure of the same protein · chain A against A, TM-score 0.84
- 1UKM · Crystal structure of EMS16, an Antagonist of collagen receptor integrin alpha2beta1… · an experimental structure of the same protein · chain A against A, TM-score 0.82
- 1UKM · Crystal structure of EMS16, an antagonist of collagen receptor integrin ALPHA2BETA1… · an experimental structure of the same protein · chain A against A, TM-score 0.82
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7T2Q1
- Elsewhere: UniProt Q7T2Q1 · AlphaFold DB Q7T2Q1
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