Research workbench
AlphaFold monomer V2.0 prediction for surface-layer 125 kda protein (P38537)
Analyse AlphaFold monomer V2.0 prediction for surface-layer 125 kda protein (P38537) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P38537
- Type
- protein
- Length
- 1,176 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd1A2963012bEcbC7A8f505464439Ab678C48936f
- Molecule
- Surface-layer 125 kda protein
- UniProt
- P38537
- Pockets
- 8 · best druggability 0.60
Structure
1 distinct chain · 16% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Surface-layer 125 kda protein | protein | 1176 | 16% helix, 38% strand | P38537 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 205 | 0.60 | 0.81 | 34 | empty |
| 2 | 383 | 0.55 | 0.74 | 40 | empty |
| 3 | 170 | 0.46 | 0.75 | 32 | empty |
| 4 | 84 | 0.40 | 0.78 | 15 | empty |
| 5 | 76 | 0.37 | 0.77 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P38537
- Elsewhere: UniProt P38537 · AlphaFold DB P38537
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