Research workbench
AlphaFold monomer V2.0 prediction for peroxidase skpo-1 (Q20616)
Analyse AlphaFold monomer V2.0 prediction for peroxidase skpo-1 (Q20616) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q20616
- Type
- protein
- Length
- 655 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbDA05C32aD6eE153C8C5A78dfa48d7Ba25694fea
- Molecule
- Peroxidase skpo-1
- UniProt
- Q20616
- Pockets
- 9 · best druggability 0.77
Structure
1 distinct chain · 37% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peroxidase skpo-1 | protein | 655 | 37% helix, 9% strand | Q20616 |
Pockets
9 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 653 | 0.77 | 0.82 | 65 | empty |
| 2 | 125 | 0.64 | 0.87 | 25 | empty |
| 3 | 340 | 0.61 | 0.78 | 31 | empty |
| 4 | 170 | 0.51 | 0.78 | 28 | empty |
| 5 | 64 | 0.42 | 0.81 | 15 | empty |
Modifications
Observed in the structure: 10 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q20616
- Elsewhere: UniProt Q20616 · AlphaFold DB Q20616
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