Research workbench
AlphaFold monomer V2.0 prediction for scf ubiquitin ligase complex protein SKP1A (P52285)
Analyse AlphaFold monomer V2.0 prediction for scf ubiquitin ligase complex protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P52285
- Type
- protein
- Length
- 162 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xCe773cD4fDc93809B870b4C80617739715B2454d
- Molecule
- Scf ubiquitin ligase complex protein SKP1A
- UniProt
- P52285
- Pockets
- 1 · best druggability 0.44
Structure
1 distinct chain · 57% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Scf ubiquitin ligase complex protein SKP1A | protein | 162 | 57% helix, 9% strand | P52285 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 163 | 0.44 | 0.75 | 19 | empty |
Compared structures
- 6V88 · Solution NMR structure of dictyostelium discoideum SKP1A (truncated) dimer · an experimental structure of the same protein · chain A against A, TM-score 0.63
- 6V88 · Solution NMR structure of Dictyostelium discoideum Skp1A (truncated) dimer · an experimental structure of the same protein · chain A against A, TM-score 0.63
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P52285
- Elsewhere: UniProt P52285 · AlphaFold DB P52285
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