Research workbench
AlphaFold monomer V2.0 prediction for transcription factor SKN7 (G0SB31)
Analyse AlphaFold monomer V2.0 prediction for transcription factor SKN7 (G0SB31) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- G0SB31
- Type
- protein
- Length
- 765 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x618720e11Fed616D6c310d644fAC3163CeE987e2
- Molecule
- Transcription factor SKN7
- UniProt
- G0SB31
- Pockets
- 1 · best druggability 0.52
Structure
1 distinct chain · 30% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcription factor SKN7 | protein | 765 | 30% helix, 5% strand | G0SB31 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 174 | 0.52 | 0.79 | 21 | empty |
Compared structures
- 5D5X · Crystal structure of chaetomium thermophilum SKN7 with ssre DNA · an experimental structure of the same protein · chain A against B, TM-score 0.13
- 5D5W · Crystal structure of chaetomium thermophilum SKN7 with hse DNA · an experimental structure of the same protein · chain A against B, TM-score 0.12
- 5D60 · Structure of chaetomium thermophilum SKN7 coiled-coil domain, crystal form III · an experimental structure of the same protein · chain A against B, TM-score 0.08
- 5D5Z · Structure of chaetomium thermophilum SKN7 coiled-coil domain, crystal form II · an experimental structure of the same protein · chain A against A, TM-score 0.06
- 5D5Z · Structure of Chaetomium thermophilum Skn7 coiled-coil domain, crystal form II · an experimental structure of the same protein · chain A against A, TM-score 0.06
- 5D5Y · Structure of Chaetomium thermophilum Skn7 coiled-coil domain, crystal form I · an experimental structure of the same protein · chain A against B, TM-score 0.06
- 5D5Y · Structure of chaetomium thermophilum SKN7 coiled-coil domain, crystal form I · an experimental structure of the same protein · chain A against B, TM-score 0.06
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G0SB31
- Elsewhere: UniProt G0SB31 · AlphaFold DB G0SB31
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