Research workbench
AlphaFold monomer V2.0 prediction for signal peptide peptidase-like 3 (Q5N808)
Analyse AlphaFold monomer V2.0 prediction for signal peptide peptidase-like 3 (Q5N808) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5N808
- Type
- protein
- Length
- 523 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
- Molecule
- Signal peptide peptidase-like 3
- UniProt
- Q5N808
- Pockets
- 8 · best druggability 0.82
Structure
1 distinct chain · 50% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Signal peptide peptidase-like 3 | protein | 523 | 50% helix, 12% strand | Q5N808 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 456 | 0.82 | 0.88 | 42 | empty |
| 2 | 743 | 0.68 | 0.76 | 45 | empty |
| 3 | 153 | 0.65 | 0.86 | 27 | empty |
| 4 | 93 | 0.62 | 0.89 | 20 | empty |
| 5 | 53 | 0.45 | 0.85 | 11 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5N808
- Elsewhere: UniProt Q5N808 · AlphaFold DB Q5N808
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