Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor sigv (O05404)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor sigv (O05404) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O05404
- Type
- protein
- Length
- 166 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xaa53776A41fB2e67da75A96E8a53746b6874aAB4
- Molecule
- RNA polymerase sigma factor sigv
- UniProt
- O05404
- Pockets
- 2 · best druggability 0.60
Structure
1 distinct chain · 78% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase sigma factor sigv | protein | 166 | 78% helix, 0% strand | O05404 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 189 | 0.60 | 0.82 | 26 | empty |
| 2 | 54 | 0.39 | 0.81 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O05404
- Elsewhere: UniProt O05404 · AlphaFold DB O05404
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