Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor SIGI7 (A3DIE4)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor SIGI7 (A3DIE4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A3DIE4
- Type
- protein
- Length
- 235 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3298b100681D3A2372Bba3b2f282750dD71629B9
- Molecule
- RNA polymerase sigma factor SIGI7
- UniProt
- A3DIE4
- Pockets
- 3 · best druggability 0.46
Structure
1 distinct chain · 71% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase sigma factor SIGI7 | protein | 235 | 71% helix, 0% strand | A3DIE4 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 86 | 0.46 | 0.81 | 20 | empty |
| 2 | 139 | 0.42 | 0.74 | 18 | empty |
| 3 | 65 | 0.31 | 0.75 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A3DIE4
- Elsewhere: UniProt A3DIE4 · AlphaFold DB A3DIE4
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