Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor SIGI1 (A3DBH0)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor SIGI1 (A3DBH0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A3DBH0
- Type
- protein
- Length
- 256 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x40B9C9d5F084D34d026E9d5Dd10501AcdF6d6152
- Molecule
- RNA polymerase sigma factor SIGI1
- UniProt
- A3DBH0
- Pockets
- 2 · best druggability 0.71
Structure
1 distinct chain · 76% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase sigma factor SIGI1 | protein | 256 | 76% helix, 0% strand | A3DBH0 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 825 | 0.71 | 0.76 | 55 | empty |
| 2 | 487 | 0.61 | 0.75 | 39 | empty |
Compared structures
- 6IVU · Solution structure of the sigma-anti-sigma factor complex RSGI1N- SIGI1C from clostridium… · an experimental structure of the same protein · chain A against B, TM-score 0.42
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A3DBH0
- Elsewhere: UniProt A3DBH0 · AlphaFold DB A3DBH0
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