Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor siga (P0A4J0)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor siga (P0A4J0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0A4J0
- Type
- protein
- Length
- 369 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x35612D34a32C306CA4fc1edA9360D1F717e25950
- Molecule
- RNA polymerase sigma factor siga
- UniProt
- P0A4J0
- Pockets
- 5 · best druggability 0.66
Structure
1 distinct chain · 66% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase sigma factor siga | protein | 369 | 66% helix, 2% strand | P0A4J0 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 644 | 0.66 | 0.76 | 52 | empty |
| 2 | 79 | 0.39 | 0.77 | 14 | empty |
| 3 | 105 | 0.39 | 0.75 | 15 | empty |
| 4 | 87 | 0.38 | 0.75 | 12 | empty |
| 5 | 84 | 0.32 | 0.74 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A4J0
- Elsewhere: UniProt P0A4J0 · AlphaFold DB P0A4J0
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