Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor siga (P52331)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor siga (P52331) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P52331
- Type
- protein
- Length
- 374 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- RNA polymerase sigma factor siga
- UniProt
- P52331
- Pockets
- 3 · best druggability 0.58
Structure
1 distinct chain · 63% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase sigma factor siga | protein | 374 | 63% helix, 2% strand | P52331 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 287 | 0.58 | 0.77 | 34 | empty |
| 2 | 111 | 0.39 | 0.75 | 18 | empty |
| 3 | 98 | 0.39 | 0.75 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P52331
- Elsewhere: UniProt P52331 · AlphaFold DB P52331
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