Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor siga (P56835)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor siga (P56835) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P56835
- Type
- protein
- Length
- 571 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9d37280c8D61e058C5085fA10417ECaD4341F28c
- Molecule
- RNA polymerase sigma factor siga
- UniProt
- P56835
- Pockets
- 5 · best druggability 0.66
Structure
1 distinct chain · 74% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase sigma factor siga | protein | 571 | 74% helix, 2% strand | P56835 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 377 | 0.66 | 0.80 | 39 | empty |
| 2 | 284 | 0.54 | 0.76 | 29 | empty |
| 3 | 155 | 0.44 | 0.74 | 15 | empty |
| 4 | 101 | 0.36 | 0.74 | 16 | empty |
| 5 | 65 | 0.35 | 0.77 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P56835
- Elsewhere: UniProt P56835 · AlphaFold DB P56835
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