Research workbench
AlphaFold monomer V2.0 prediction for integrin beta-like protein D (Q54JA4)
Analyse AlphaFold monomer V2.0 prediction for integrin beta-like protein D (Q54JA4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q54JA4
- Type
- protein
- Length
- 1,957 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa147A692fF376AB34131A56a056E6E7826B01623
- Molecule
- Integrin beta-like protein D
- UniProt
- Q54JA4
- Pockets
- 13 · best druggability 0.72
Structure
1 distinct chain · 8% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Integrin beta-like protein D | protein | 1957 | 8% helix, 43% strand | Q54JA4 |
Pockets
13 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 877 | 0.72 | 0.77 | 96 | empty |
| 2 | 307 | 0.63 | 0.80 | 31 | empty |
| 3 | 408 | 0.61 | 0.77 | 42 | empty |
| 4 | 465 | 0.59 | 0.74 | 45 | empty |
| 5 | 57 | 0.52 | 0.87 | 16 | empty |
Modifications
Observed in the structure: 16 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q54JA4
- Elsewhere: UniProt Q54JA4 · AlphaFold DB Q54JA4
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