Research workbench
AlphaFold monomer V2.0 prediction for protein sawadee homeodomain homolog 1 (Q9XI47)
Analyse AlphaFold monomer V2.0 prediction for protein sawadee homeodomain homolog 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9XI47
- Type
- protein
- Length
- 258 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF78C9477c2720e82674bE2b804A22DBB3A2463f
- Molecule
- Protein sawadee homeodomain homolog 1
- UniProt
- Q9XI47
- Pockets
- 1 · best druggability 0.38
Structure
1 distinct chain · 28% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein sawadee homeodomain homolog 1 | protein | 258 | 28% helix, 27% strand | Q9XI47 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 133 | 0.38 | 0.73 | 20 | empty |
Compared structures
- 4IUQ · Crystal structure of SHH1 sawadee domain · an experimental structure of the same protein · chain A against A, TM-score 0.51
- 4IUQ · crystal structure of SHH1 SAWADEE domain · an experimental structure of the same protein · chain A against A, TM-score 0.51
- 4IUT · Crystal structure of SHH1 sawadee domain in complex with H3K9ME2 peptide · an experimental structure of the same protein · chain A against B, TM-score 0.51
- 4IUT · crystal structure of SHH1 SAWADEE domain in complex with H3K9me2 peptide · an experimental structure of the same protein · chain A against B, TM-score 0.51
- 4IUR · Crystal structure of SHH1 sawadee domain in complex with H3K9ME3 peptide · an experimental structure of the same protein · chain A against A, TM-score 0.51
- 4IUR · crystal structure of SHH1 SAWADEE domain in complex with H3K9me3 peptide · an experimental structure of the same protein · chain A against A, TM-score 0.51
- 4IUP · Crystal structure of se-substituted arabidopsis thaliana SHH1 sawadee domain L200M/L218M… · an experimental structure of the same protein · chain A against B, TM-score 0.51
- 4IUP · crystal structure of Se-substituted arabidopsis thaliana SHH1 SAWADEE domain L200M/L218M… · an experimental structure of the same protein · chain A against B, TM-score 0.51
- 4IUU · Crystal structure of SHH1 SAWADEE domain in complex with H3K9me1 peptide · an experimental structure of the same protein · chain A against B, TM-score 0.51
- 4IUU · Crystal structure of SHH1 sawadee domain in complex with H3K9ME1 peptide · an experimental structure of the same protein · chain A against B, TM-score 0.51
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9XI47
- Elsewhere: UniProt Q9XI47 · AlphaFold DB Q9XI47
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.