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AlphaFold monomer V2.0 prediction for small G protein signaling modulator 1 (Q8BPQ7)

Analyse AlphaFold monomer V2.0 prediction for small G protein signaling modulator 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q8BPQ7
Type: protein
Length: 1,093 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
Molecule: Small G protein signaling modulator 1
UniProt: Q8BPQ7
Pockets: 10 · best druggability 0.70

Structure

1 distinct chain · 42% helix, 6% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Small G protein signaling modulator 1	protein	1093	42% helix, 6% strand	Q8BPQ7

Pockets

10 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	699	0.70	0.77	51	empty
2	263	0.57	0.78	30	empty
3	181	0.46	0.75	21	empty
4	149	0.43	0.75	22	empty
5	99	0.39	0.76	20	empty

Compared structures

4QXA · Crystal structure of the Rab9A-RUTBC2 RBD complex · an experimental structure of the same protein · chain A against B, TM-score 0.13
4QXA · Crystal structure of the RAB9A-RUTBC2 rbd complex · an experimental structure of the same protein · chain A against B, TM-score 0.13

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8BPQ7
Elsewhere: UniProt Q8BPQ7 · AlphaFold DB Q8BPQ7

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