Research workbench
AlphaFold monomer V2.0 prediction for sphingosine-1-phosphate lyase 1 (Q8CHN6)
Analyse AlphaFold monomer V2.0 prediction for sphingosine-1-phosphate lyase 1 (Q8CHN6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8CHN6
- Type
- protein
- Length
- 568 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x79a905d858Ce72991FD6E7a9C6498620f42E146D
- Molecule
- Sphingosine-1-phosphate lyase 1
- UniProt
- Q8CHN6
- Pockets
- 7 · best druggability 0.57
Structure
1 distinct chain · 50% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sphingosine-1-phosphate lyase 1 | protein | 568 | 50% helix, 11% strand | Q8CHN6 |
Pockets
7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 340 | 0.57 | 0.75 | 37 | empty |
| 2 | 127 | 0.46 | 0.78 | 20 | empty |
| 3 | 58 | 0.42 | 0.81 | 16 | empty |
| 4 | 135 | 0.42 | 0.75 | 24 | empty |
| 5 | 90 | 0.41 | 0.78 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8CHN6
- Elsewhere: UniProt Q8CHN6 · AlphaFold DB Q8CHN6
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