Research workbench
AlphaFold monomer V2.0 prediction for 6-deoxy-6-sulfo-D-gluconate dehydratase (P0DOV7)
Analyse AlphaFold monomer V2.0 prediction for 6-deoxy-6-sulfo-D-gluconate dehydratase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0DOV7
- Type
- protein
- Length
- 579 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
- Molecule
- 6-deoxy-6-sulfo-D-gluconate dehydratase
- UniProt
- P0DOV7
- Pockets
- 7 · best druggability 0.65
Structure
1 distinct chain · 41% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 6-deoxy-6-sulfo-D-gluconate dehydratase | protein | 579 | 41% helix, 14% strand | P0DOV7 |
Pockets
7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 525 | 0.65 | 0.77 | 51 | empty |
| 2 | 108 | 0.36 | 0.74 | 22 | empty |
| 3 | 85 | 0.34 | 0.75 | 22 | empty |
| 4 | 93 | 0.34 | 0.74 | 19 | empty |
| 5 | 76 | 0.33 | 0.75 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DOV7
- Elsewhere: UniProt P0DOV7 · AlphaFold DB P0DOV7
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