Research workbench
AlphaFold monomer V2.0 prediction for chromatin structure-remodeling complex subunit SFH1 (Q06168)
Analyse AlphaFold monomer V2.0 prediction for chromatin structure-remodeling complex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q06168
- Type
- protein
- Length
- 426 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4d07E6a23DeB6B95bd9b90EcB67368b7e8D3B77e
- Molecule
- Chromatin structure-remodeling complex subunit SFH1
- UniProt
- Q06168
- Pockets
- 4 · best druggability 0.71
Structure
1 distinct chain · 32% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Chromatin structure-remodeling complex subunit SFH1 | protein | 426 | 32% helix, 11% strand | Q06168 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 899 | 0.71 | 0.76 | 72 | empty |
| 2 | 367 | 0.70 | 0.83 | 33 | empty |
| 3 | 218 | 0.47 | 0.74 | 24 | empty |
| 4 | 95 | 0.36 | 0.75 | 17 | empty |
Compared structures
- 6V92 · RSC-NCP · an experimental structure of the same protein · chain A against Q, TM-score 0.45
- 6V92 · RSC-NCP · an experimental structure of the same protein · chain A against Q, TM-score 0.45
- 6V8O · RSC CORE · an experimental structure of the same protein · chain A against Q, TM-score 0.45
- 6TDA · Structure of SWI/SNF chromatin remodeler rsc bound to a nucleosome · an experimental structure of the same protein · chain A against K, TM-score 0.43
- 6K15 · RSC substrate-recruitment module · an experimental structure of the same protein · chain A against G, TM-score 0.43
- 6K15 · Rsc substrate-recruitment module · an experimental structure of the same protein · chain A against G, TM-score 0.43
- 6KW5 · The classc rsc-nucleosome complex · an experimental structure of the same protein · chain A against G, TM-score 0.43
- 6KW4 · The classb rsc-nucleosome complex · an experimental structure of the same protein · chain A against G, TM-score 0.43
- 6KW3 · The classa rsc-nucleosome complex · an experimental structure of the same protein · chain A against G, TM-score 0.42
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q06168
- Elsewhere: UniProt Q06168 · AlphaFold DB Q06168
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