Research workbench
AlphaFold monomer V2.0 prediction for set domain-containing protein 4 (Q9NVD3)
Analyse AlphaFold monomer V2.0 prediction for set domain-containing protein 4 (Q9NVD3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9NVD3
- Type
- protein
- Length
- 440 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xaa53776A41fB2e67da75A96E8a53746b6874aAB4
- Molecule
- Set domain-containing protein 4
- UniProt
- Q9NVD3
- Pockets
- 5 · best druggability 0.55
Structure
1 distinct chain · 52% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Set domain-containing protein 4 | protein | 440 | 52% helix, 12% strand | Q9NVD3 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 260 | 0.55 | 0.76 | 27 | empty |
| 2 | 277 | 0.54 | 0.76 | 38 | empty |
| 3 | 65 | 0.53 | 0.87 | 18 | empty |
| 4 | 126 | 0.50 | 0.80 | 27 | empty |
| 5 | 57 | 0.26 | 0.72 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NVD3
- Elsewhere: UniProt Q9NVD3 · AlphaFold DB Q9NVD3
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