Research workbench
AlphaFold monomer V2.0 prediction for potential protein lysine methyltransferase SET5 (A5DQN2)
Analyse AlphaFold monomer V2.0 prediction for potential protein lysine… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5DQN2
- Type
- protein
- Length
- 483 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- Potential protein lysine methyltransferase SET5
- UniProt
- A5DQN2
- Pockets
- 6 · best druggability 0.74
Structure
1 distinct chain · 41% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Potential protein lysine methyltransferase SET5 | protein | 483 | 41% helix, 10% strand | A5DQN2 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1191 | 0.74 | 0.77 | 90 | empty |
| 2 | 134 | 0.69 | 0.90 | 30 | empty |
| 3 | 243 | 0.61 | 0.81 | 33 | empty |
| 4 | 161 | 0.45 | 0.75 | 25 | empty |
| 5 | 91 | 0.39 | 0.77 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5DQN2
- Elsewhere: UniProt A5DQN2 · AlphaFold DB A5DQN2
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