Research workbench
AlphaFold monomer V2.0 prediction for somatic embryogenesis receptor kinase 5 (Q8LPS5)
Analyse AlphaFold monomer V2.0 prediction for somatic embryogenesis receptor kinase 5… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8LPS5
- Type
- protein
- Length
- 601 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb17F0b89Fb447a3F06B40871336A733435186471
- Molecule
- Somatic embryogenesis receptor kinase 5
- UniProt
- Q8LPS5
- Pockets
- 8 · best druggability 0.77
Structure
1 distinct chain · 37% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Somatic embryogenesis receptor kinase 5 | protein | 601 | 37% helix, 15% strand | Q8LPS5 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 585 | 0.77 | 0.84 | 78 | empty |
| 2 | 743 | 0.73 | 0.79 | 63 | empty |
| 3 | 105 | 0.39 | 0.75 | 21 | empty |
| 4 | 72 | 0.30 | 0.73 | 15 | empty |
| 5 | 58 | 0.30 | 0.75 | 15 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8LPS5
- Elsewhere: UniProt Q8LPS5 · AlphaFold DB Q8LPS5
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