Research workbench
AlphaFold monomer V2.0 prediction for O-phosphoserine--TRNA(CYS) ligase (O30126)
Analyse AlphaFold monomer V2.0 prediction for O-phosphoserine--TRNA(CYS) ligase (O30126) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O30126
- Type
- protein
- Length
- 534 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF3ACd2a4D8BeEE52Ec7E86d2C7c482Bf354b139B
- Molecule
- O-phosphoserine--TRNA(CYS) ligase
- UniProt
- O30126
- Pockets
- 2 · best druggability 0.73
Structure
1 distinct chain · 39% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | O-phosphoserine--TRNA(CYS) ligase | protein | 534 | 39% helix, 25% strand | O30126 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 461 | 0.73 | 0.83 | 54 | empty |
| 2 | 89 | 0.36 | 0.75 | 20 | empty |
Compared structures
- 2DU5 · Crystal structure of Archaeoglobus fulgidus O-phosphoseryl-tRNA synthetase E418N/E420N… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 2DU5 · Crystal structure of archaeoglobus fulgidus O-phosphoseryl-tRNA synthetase E418N/E420N… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 2DU3 · Crystal structure of archaeoglobus fulgidus O-phosphoseryl- tRNA synthetase complexed… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 2DU3 · Crystal structure of Archaeoglobus fulgidus O-phosphoseryl-tRNA synthetase complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 2DU6 · Crystal structure of archaeoglobus fulgidus O-phosphoseryl-tRNA synthetase E418N/E420N… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 2DU6 · Crystal structure of Archaeoglobus fulgidus O-phosphoseryl-tRNA synthetase E418N/E420N… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 2DU4 · Crystal structure of Archaeoglobus fulgidus O-phosphoseryl-tRNA synthetase complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.87
- 2DU4 · Crystal structure of archaeoglobus fulgidus O-phosphoseryl- tRNA synthetase complexed… · an experimental structure of the same protein · chain A against A, TM-score 0.87
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O30126
- Elsewhere: UniProt O30126 · AlphaFold DB O30126
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