Research workbench
AlphaFold monomer V2.0 prediction for semaphorin-6C (Q9WTL3)
Analyse AlphaFold monomer V2.0 prediction for semaphorin-6C (Q9WTL3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9WTL3
- Type
- protein
- Length
- 960 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5e58272ea25a05e06901A2eAe9f63939b344e0c6
- Molecule
- Semaphorin-6C
- UniProt
- Q9WTL3
- Pockets
- 5 · best druggability 0.76
Structure
1 distinct chain · 12% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Semaphorin-6C | protein | 960 | 12% helix, 22% strand | Q9WTL3 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1184 | 0.76 | 0.78 | 95 | empty |
| 2 | 241 | 0.56 | 0.78 | 34 | empty |
| 3 | 163 | 0.42 | 0.74 | 27 | empty |
| 4 | 94 | 0.41 | 0.77 | 14 | empty |
| 5 | 70 | 0.31 | 0.74 | 17 | empty |
Modifications
Observed in the structure: 8 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9WTL3
- Elsewhere: UniProt Q9WTL3 · AlphaFold DB Q9WTL3
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