Research workbench
AlphaFold monomer V2.0 prediction for semaphorin-2A (Q60PR7)
Analyse AlphaFold monomer V2.0 prediction for semaphorin-2A (Q60PR7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q60PR7
- Type
- protein
- Length
- 656 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
- Molecule
- Semaphorin-2A
- UniProt
- Q60PR7
- Pockets
- 5 · best druggability 0.78
Structure
1 distinct chain · 15% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Semaphorin-2A | protein | 656 | 15% helix, 41% strand | Q60PR7 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 998 | 0.78 | 0.80 | 61 | empty |
| 2 | 323 | 0.70 | 0.83 | 29 | empty |
| 3 | 109 | 0.46 | 0.79 | 21 | empty |
| 4 | 110 | 0.43 | 0.77 | 18 | empty |
| 5 | 84 | 0.34 | 0.74 | 17 | empty |
Modifications
Observed in the structure: 7 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q60PR7
- Elsewhere: UniProt Q60PR7 · AlphaFold DB Q60PR7
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