Research workbench
AlphaFold monomer V2.0 prediction for L-seryl-TRNA(SEC) selenium transferase (Q8EKI8)
Analyse AlphaFold monomer V2.0 prediction for L-seryl-TRNA(SEC) selenium transferase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8EKI8
- Type
- protein
- Length
- 473 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5A5f617b5f7A19DF653B3530c1C72bf12240602A
- Molecule
- L-seryl-TRNA(SEC) selenium transferase
- UniProt
- Q8EKI8
- Pockets
- 3 · best druggability 0.56
Structure
1 distinct chain · 48% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | L-seryl-TRNA(SEC) selenium transferase | protein | 473 | 48% helix, 19% strand | Q8EKI8 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 266 | 0.56 | 0.78 | 36 | empty |
| 2 | 94 | 0.47 | 0.81 | 21 | empty |
| 3 | 102 | 0.42 | 0.78 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8EKI8
- Elsewhere: UniProt Q8EKI8 · AlphaFold DB Q8EKI8
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