Research workbench
AlphaFold monomer V2.0 prediction for L-seryl-TRNA(SEC) selenium transferase (B9KDG5)
Analyse AlphaFold monomer V2.0 prediction for L-seryl-TRNA(SEC) selenium transferase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B9KDG5
- Type
- protein
- Length
- 443 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- L-seryl-TRNA(SEC) selenium transferase
- UniProt
- B9KDG5
- Pockets
- 5 · best druggability 0.57
Structure
1 distinct chain · 45% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | L-seryl-TRNA(SEC) selenium transferase | protein | 443 | 45% helix, 20% strand | B9KDG5 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 179 | 0.57 | 0.81 | 30 | empty |
| 2 | 111 | 0.52 | 0.82 | 20 | empty |
| 3 | 163 | 0.50 | 0.78 | 27 | empty |
| 4 | 103 | 0.48 | 0.80 | 25 | empty |
| 5 | 77 | 0.32 | 0.74 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B9KDG5
- Elsewhere: UniProt B9KDG5 · AlphaFold DB B9KDG5
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