Research workbench
AlphaFold monomer V2.0 prediction for nucleoporin SEH1 (A8WVD2)
Analyse AlphaFold monomer V2.0 prediction for nucleoporin SEH1 (A8WVD2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A8WVD2
- Type
- protein
- Length
- 366 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF8cD1d8d93E9783063700De244A6e3cf6A195579
- Molecule
- Nucleoporin SEH1
- UniProt
- A8WVD2
- Pockets
- 5 · best druggability 0.74
Structure
1 distinct chain · 7% helix, 46% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleoporin SEH1 | protein | 366 | 7% helix, 46% strand | A8WVD2 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 642 | 0.74 | 0.80 | 47 | empty |
| 2 | 67 | 0.38 | 0.78 | 13 | empty |
| 3 | 71 | 0.38 | 0.78 | 16 | empty |
| 4 | 54 | 0.29 | 0.75 | 17 | empty |
| 5 | 50 | 0.26 | 0.74 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8WVD2
- Elsewhere: UniProt A8WVD2 · AlphaFold DB A8WVD2
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