Research workbench
AlphaFold monomer V2.0 prediction for outer membrane usher protein sefc (P33388)
Analyse AlphaFold monomer V2.0 prediction for outer membrane usher protein sefc (P33388) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P33388
- Type
- protein
- Length
- 814 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF25799609c3112487CBaCFd8059A5b2D59a35379
- Molecule
- Outer membrane usher protein sefc
- UniProt
- P33388
- Pockets
- 10 · best druggability 0.81
Structure
1 distinct chain · 11% helix, 55% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Outer membrane usher protein sefc | protein | 814 | 11% helix, 55% strand | P33388 |
Pockets
10 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 588 | 0.81 | 0.86 | 47 | empty |
| 2 | 764 | 0.78 | 0.82 | 68 | empty |
| 3 | 479 | 0.77 | 0.85 | 79 | empty |
| 4 | 756 | 0.77 | 0.81 | 62 | empty |
| 5 | 270 | 0.64 | 0.82 | 34 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P33388
- Elsewhere: UniProt P33388 · AlphaFold DB P33388
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