Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit secy (Q9YDD0)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit secy (Q9YDD0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9YDD0
- Type
- protein
- Length
- 457 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- Protein translocase subunit secy
- UniProt
- Q9YDD0
- Pockets
- 6 · best druggability 0.73
Structure
1 distinct chain · 65% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit secy | protein | 457 | 65% helix, 4% strand | Q9YDD0 |
Pockets
6 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 266 | 0.73 | 0.87 | 45 | empty |
| 2 | 705 | 0.72 | 0.78 | 61 | empty |
| 3 | 285 | 0.65 | 0.82 | 43 | empty |
| 4 | 233 | 0.57 | 0.78 | 27 | empty |
| 5 | 135 | 0.51 | 0.80 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9YDD0
- Elsewhere: UniProt Q9YDD0 · AlphaFold DB Q9YDD0
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