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AlphaFold monomer V2.0 prediction for accessory sec system protein translocase subunit SECY2 (D3HAJ5)
Analyse AlphaFold monomer V2.0 prediction for accessory sec system protein translocase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- D3HAJ5
- Type
- protein
- Length
- 405 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x20C5e5d7A4E1b00104Ce511ca8336185Bdda8440
- Molecule
- Accessory sec system protein translocase subunit SECY2
- UniProt
- D3HAJ5
- Pockets
- 6 · best druggability 0.57
Structure
1 distinct chain · 75% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Accessory sec system protein translocase subunit SECY2 | protein | 405 | 75% helix, 5% strand | D3HAJ5 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 114 | 0.57 | 0.84 | 25 | empty |
| 2 | 313 | 0.55 | 0.75 | 47 | empty |
| 3 | 120 | 0.51 | 0.80 | 28 | empty |
| 4 | 56 | 0.41 | 0.81 | 10 | empty |
| 5 | 69 | 0.40 | 0.79 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D3HAJ5
- Elsewhere: UniProt D3HAJ5 · AlphaFold DB D3HAJ5
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