Research workbench
AlphaFold monomer V2.0 prediction for accessory sec system protein translocase subunit SECY2 (Q9AEU0)
Analyse AlphaFold monomer V2.0 prediction for accessory sec system protein translocase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9AEU0
- Type
- protein
- Length
- 407 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x78Cc7f9BF18AF8279e492D45EE7Fe9d7cC6f6D07
- Molecule
- Accessory sec system protein translocase subunit SECY2
- UniProt
- Q9AEU0
- Pockets
- 5 · best druggability 0.57
Structure
1 distinct chain · 72% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Accessory sec system protein translocase subunit SECY2 | protein | 407 | 72% helix, 4% strand | Q9AEU0 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 280 | 0.57 | 0.77 | 44 | empty |
| 2 | 213 | 0.55 | 0.78 | 30 | empty |
| 3 | 128 | 0.52 | 0.81 | 26 | empty |
| 4 | 72 | 0.35 | 0.75 | 15 | empty |
| 5 | 99 | 0.32 | 0.72 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9AEU0
- Elsewhere: UniProt Q9AEU0 · AlphaFold DB Q9AEU0
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