Research workbench
AlphaFold monomer V2.0 prediction for protein-export membrane protein secd (Q18FQ8)
Analyse AlphaFold monomer V2.0 prediction for protein-export membrane protein secd… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q18FQ8
- Type
- protein
- Length
- 520 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x16edbd69fA6426C5Ff9f390C84fca594D6d96523
- Molecule
- Protein-export membrane protein secd
- UniProt
- Q18FQ8
- Pockets
- 5 · best druggability 0.59
Structure
1 distinct chain · 51% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein-export membrane protein secd | protein | 520 | 51% helix, 19% strand | Q18FQ8 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 419 | 0.59 | 0.76 | 55 | empty |
| 2 | 180 | 0.54 | 0.78 | 19 | empty |
| 3 | 323 | 0.54 | 0.75 | 42 | empty |
| 4 | 88 | 0.45 | 0.80 | 19 | empty |
| 5 | 119 | 0.41 | 0.76 | 29 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q18FQ8
- Elsewhere: UniProt Q18FQ8 · AlphaFold DB Q18FQ8
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