Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca (Q1JK98)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca (Q1JK98) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q1JK98
- Type
- protein
- Length
- 839 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- Protein translocase subunit seca
- UniProt
- Q1JK98
- Pockets
- 11 · best druggability 0.84
Structure
1 distinct chain · 55% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca | protein | 839 | 55% helix, 11% strand | Q1JK98 |
Pockets
11 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1001 | 0.84 | 0.85 | 115 | empty |
| 2 | 274 | 0.67 | 0.83 | 40 | empty |
| 3 | 302 | 0.61 | 0.79 | 33 | empty |
| 4 | 123 | 0.58 | 0.84 | 25 | empty |
| 5 | 107 | 0.51 | 0.81 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1JK98
- Elsewhere: UniProt Q1JK98 · AlphaFold DB Q1JK98
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