Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca (A5CYJ1)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca (A5CYJ1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5CYJ1
- Type
- protein
- Length
- 886 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7e0FFEEde44b37B891B739816c83d100c7a675E3
- Molecule
- Protein translocase subunit seca
- UniProt
- A5CYJ1
- Pockets
- 9 · best druggability 0.84
Structure
1 distinct chain · 56% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca | protein | 886 | 56% helix, 11% strand | A5CYJ1 |
Pockets
9 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 899 | 0.84 | 0.86 | 99 | empty |
| 2 | 558 | 0.70 | 0.79 | 52 | empty |
| 3 | 537 | 0.68 | 0.78 | 60 | empty |
| 4 | 53 | 0.55 | 0.90 | 16 | empty |
| 5 | 123 | 0.54 | 0.82 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5CYJ1
- Elsewhere: UniProt A5CYJ1 · AlphaFold DB A5CYJ1
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