Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca (B4RKY2)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca (B4RKY2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B4RKY2
- Type
- protein
- Length
- 916 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd10960F956646DE8b64d3598984c91C2d5Af3D7b
- Molecule
- Protein translocase subunit seca
- UniProt
- B4RKY2
- Pockets
- 9 · best druggability 0.75
Structure
1 distinct chain · 55% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca | protein | 916 | 55% helix, 11% strand | B4RKY2 |
Pockets
9 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 904 | 0.75 | 0.78 | 77 | empty |
| 2 | 567 | 0.70 | 0.79 | 47 | empty |
| 3 | 367 | 0.59 | 0.76 | 42 | empty |
| 4 | 292 | 0.57 | 0.77 | 52 | empty |
| 5 | 101 | 0.55 | 0.84 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4RKY2
- Elsewhere: UniProt B4RKY2 · AlphaFold DB B4RKY2
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