Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca (A6VYJ1)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca (A6VYJ1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A6VYJ1
- Type
- protein
- Length
- 900 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2C4E0FCA494345B505D94d585396b6d311a26F28
- Molecule
- Protein translocase subunit seca
- UniProt
- A6VYJ1
- Pockets
- 9 · best druggability 0.74
Structure
1 distinct chain · 55% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca | protein | 900 | 55% helix, 12% strand | A6VYJ1 |
Pockets
9 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1174 | 0.74 | 0.77 | 85 | empty |
| 2 | 51 | 0.69 | 0.98 | 20 | empty |
| 3 | 507 | 0.67 | 0.78 | 50 | empty |
| 4 | 527 | 0.67 | 0.78 | 55 | empty |
| 5 | 420 | 0.64 | 0.78 | 54 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6VYJ1
- Elsewhere: UniProt A6VYJ1 · AlphaFold DB A6VYJ1
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