Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca (B1IR80)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca (B1IR80) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1IR80
- Type
- protein
- Length
- 901 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5BeA89782341f98147F2D811B063F91F0aE7D7bF
- Molecule
- Protein translocase subunit seca
- UniProt
- B1IR80
- Pockets
- 10 · best druggability 0.77
Structure
1 distinct chain · 58% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca | protein | 901 | 58% helix, 11% strand | B1IR80 |
Pockets
10 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 669 | 0.77 | 0.82 | 88 | empty |
| 2 | 157 | 0.64 | 0.86 | 28 | empty |
| 3 | 453 | 0.64 | 0.77 | 43 | empty |
| 4 | 164 | 0.60 | 0.83 | 38 | empty |
| 5 | 338 | 0.58 | 0.76 | 27 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1IR80
- Elsewhere: UniProt B1IR80 · AlphaFold DB B1IR80
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