Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca (B5E808)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca (B5E808) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5E808
- Type
- protein
- Length
- 958 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3298b100681D3A2372Bba3b2f282750dD71629B9
- Molecule
- Protein translocase subunit seca
- UniProt
- B5E808
- Pockets
- 9 · best druggability 0.71
Structure
1 distinct chain · 57% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca | protein | 958 | 57% helix, 11% strand | B5E808 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 645 | 0.71 | 0.78 | 58 | empty |
| 2 | 673 | 0.68 | 0.77 | 61 | empty |
| 3 | 709 | 0.68 | 0.76 | 85 | empty |
| 4 | 71 | 0.45 | 0.82 | 21 | empty |
| 5 | 105 | 0.39 | 0.76 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5E808
- Elsewhere: UniProt B5E808 · AlphaFold DB B5E808
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