Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca (Q39JW1)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca (Q39JW1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q39JW1
- Type
- protein
- Length
- 932 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x117E5163DF1bD8F3b06437B966A7eb1f790855eb
- Molecule
- Protein translocase subunit seca
- UniProt
- Q39JW1
- Pockets
- 7 · best druggability 0.85
Structure
1 distinct chain · 55% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca | protein | 932 | 55% helix, 11% strand | Q39JW1 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1046 | 0.85 | 0.86 | 111 | empty |
| 2 | 885 | 0.77 | 0.80 | 84 | empty |
| 3 | 128 | 0.69 | 0.90 | 20 | empty |
| 4 | 120 | 0.56 | 0.84 | 26 | empty |
| 5 | 156 | 0.44 | 0.75 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q39JW1
- Elsewhere: UniProt Q39JW1 · AlphaFold DB Q39JW1
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