Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca (C5C1N8)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca (C5C1N8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C5C1N8
- Type
- protein
- Length
- 968 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7f1551b80937EA71C2fdec3265869D551199705d
- Molecule
- Protein translocase subunit seca
- UniProt
- C5C1N8
- Pockets
- 11 · best druggability 0.78
Structure
1 distinct chain · 53% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca | protein | 968 | 53% helix, 11% strand | C5C1N8 |
Pockets
11 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1105 | 0.78 | 0.80 | 129 | empty |
| 2 | 422 | 0.71 | 0.82 | 45 | empty |
| 3 | 358 | 0.58 | 0.76 | 36 | empty |
| 4 | 157 | 0.52 | 0.79 | 24 | empty |
| 5 | 227 | 0.48 | 0.74 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C5C1N8
- Elsewhere: UniProt C5C1N8 · AlphaFold DB C5C1N8
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